Prospecting for Zoonotic Pathogens by Using Targeted DNA Enrichment
dc.creator | Enabulele, Egie E. | |
dc.creator | Clec'h, Winka Le | |
dc.creator | Roberts, Emma K. (TTU) | |
dc.creator | Thompson, Cody W. | |
dc.creator | McDonough, Molly M. | |
dc.creator | Ferguson, Adam W. | |
dc.creator | Bradley, Robert D. (TTU) | |
dc.creator | Anderson, Timothy J.C. | |
dc.creator | Platt, Roy N. | |
dc.date.accessioned | 2023-08-16T14:37:57Z | |
dc.date.available | 2023-08-16T14:37:57Z | |
dc.date.issued | 2023 | |
dc.description | © 2023 Centers for Disease Control and Prevention (CDC). All rights reserved. cc-by | |
dc.description.abstract | More than 60 zoonoses are linked to small mammals, including some of the most devastating pathogens in human history. Millions of museum-archived tissues are available to understand natural history of those pathogens. Our goal was to maximize the value of museum collections for pathogen-based research by using targeted sequence capture. We generated a probe panel that includes 39,916 80-bp RNA probes targeting 32 pathogen groups, including bacteria, helminths, fungi, and protozoans. Laboratory-generated, mock-control samples showed that we are capable of enriching targeted loci from pathogen DNA 2,882-6,746-fold. We identified bacterial species in museum-archived samples, including Bartonella, a known human zoonosis. These results showed that probe-based enrichment of pathogens is a highly customizable and efficient method for identifying pathogens from museum-archived tissues. | |
dc.identifier.citation | Enabulele, E.E., Clec'h, W.L., Roberts, E.K., Thompson, C.W., McDonough, M.M., Ferguson, A.W., Bradley, R.D., Anderson, T.J.C., & Platt, II, R.N.. 2023. Prospecting for Zoonotic Pathogens by Using Targeted DNA Enrichment. Emerging Infectious Diseases, 29(8). https://doi.org/10.3201/eid2908.221818 | |
dc.identifier.uri | https://doi.org/10.3201/eid2908.221818 | |
dc.identifier.uri | https://hdl.handle.net/2346/95594 | |
dc.language.iso | eng | |
dc.title | Prospecting for Zoonotic Pathogens by Using Targeted DNA Enrichment | |
dc.type | Article |
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